Specialist Accountants for Portfolio Doctors & Multi-Income Clinicians

Accountants for Doctors with Multiple Income Streams

Modern medical careers are rarely one job. A single tax year can contain an NHS salary, a partnership profit share, locum sessions, out-of-hours shifts, private clinics, medico-legal reports, teaching, appraisal work, a company directorship and rental income from the flat you never got round to selling. Each is taxed differently, each affects your pension allowance, and HMRC expects them all in one return. Bringing that together correctly is exactly what we do.

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⭐ What Clients Say About Us

See what GPs, practice partners, locums and private consultants say about working with our healthcare accounting team.

Which Portfolio Doctors Do We Support

We act for clinicians whose income arrives from several directions at once. The more sources you have, the more there is to get wrong and the more there is to plan.

A PAYE salary alongside locum, private or medico-legal income, with tax codes reconciled and payments on account forecast so January never surprises you.

Partners With Outside Interests

Partnership profit share plus teaching, appraisal, ICB or CCG roles, medico-legal work and directorships, coordinated into a single tax and pension position.

Salary, dividends, partnership profits and employment income modelled together so allowances, thresholds and the personal allowance taper are managed deliberately.

Doctors With Property or Investment Income

Rental profits, furnished holiday lets, dividends and capital gains brought into the plan, including the effect on adjusted net income and pension tapering.

Our Services for Multi-Income Doctors

When income comes from six places, the value of an accountant is in the coordination. Every service below is designed to bring the pieces together.

One return covering employment, self employment, partnership, dividend, property and foreign income, fully reconciled to every P60, remittance and statement.

Multiple employments checked for duplicated allowances and emergency codes, overpayments reclaimed and HMRC asked to correct coding for the following year.

Annual Allowance, carry forward and tapering calculated across NHS growth and any private pension contributions, using your full income picture.

Structure Review Across Income Streams

Deciding which income belongs in a company, which stays personal, and how to sequence drawings so you are not paying tax at 60 per cent unnecessarily.

Cash Flow & Tax Reserve Planning

A single reserve calculation covering every stream, with quarterly updates, so the money for January and July is always already there.

Challenges Multi-Income Doctors Face

Portfolio careers create tax problems that would never arise from a single job. These are the ones we see and fix:

Duplicated personal allowances across two or more employments

Income streams forgotten entirely until HMRC asks

Personal allowance withdrawn and a 60 per cent effective rate

Annual Allowance tapering triggered by combined income

Payments on account calculated on an unrepresentative year

Expenses claimed against the wrong income stream

No single view of what is actually owed until January

Why Portfolio Doctors Choose CruseBurke

Complexity is where good accountancy earns its fee. Our team handles multi-source medical income every week. Here is what you get:

One Complete Picture

Every income stream in one place, reconciled and reported, so you finally know your real total income and real total tax.

Coding Errors Corrected

Multiple employments checked and refunds reclaimed, with HMRC coding fixed so the same mistake does not repeat every year.

Pension & Income Tax Together

Annual Allowance, tapering and income tax modelled as one calculation rather than treated as separate problems by separate advisers.

Threshold Planning

Deliberate management of the personal allowance taper, child benefit charge and higher rate thresholds using pension, gift aid and timing.

Reserves You Can Trust

A single, quarterly-updated tax reserve figure covering everything, so January is a transfer rather than a crisis.

Fair, Fixed Fees

One agreed fee covering all your income streams, quoted up front, with unlimited telephone and email support.

Our Simple 3-Step Process for Portfolio Doctors

The more income streams you have, the more time a good system saves you. Our three-step process gets you set up quickly and keeps you informed all year:

1. Initial Consultation (It’s Free):

We begin by getting to know your practice and understanding your unique needs. This step ensures we have a clear picture of your operations and your goals.

2. Customised Plan:

Based on our initial discussion, we create a personalised plan designed specifically for you. The aim is to keep everything organised and easy to follow. You can rest assured that your numbers are being handled with expert precision.

3. Ongoing Support & Updates:

From there, we take care of the ongoing work and keep you updated with reports. You’ll always know what’s happening, and we’re always here to answer your questions, ensuring you have a clear picture of your financial health at all times.

What Makes CruseBurke Different

Chartered, experienced and genuinely specialised in healthcare. Here is what working with us looks like in practice:

Technology Driven

We use Xero, Quickbooks, Sage & many other online software.

Dedicated Medical Accountant

Meet, call or email the same qualified accountant who knows your practice and your pension position.

Unlimited Support

Free telephone & email support
throughout the year.

Experienced Team

Our team have over 100 years of combined experienced.

Free - Email Reminders

Never Miss any deadline with our automated email reminders.

Yes, We Are Chartered!

We’re an ICAEW, ACCA & AAT accredited Firm.

How to Switch to Our Portfolio Doctor Accountants

Take a back seat and let our specialist healthcare accountants handle everything. Switching part way through the year is straightforward and you never need to speak to your old accountant:

Get in touch

Reach out to us, and we’ll discuss your needs and how we can help your healthcare practice thrive.

Letter of Engagement

We’ll send over a simple letter to formalise our partnership and get everything in motion.

Previous Accountants

If you're switching, we’ll take care of contacting your previous accountants to make the transition smooth.

We Do the Rest

From there, sit back and relax. We’ll manage your accounts, taxes, and everything in between, keeping your practice running smoothly.

FAQs about Doctors with Multiple Income Streams

Do I need to declare every source of income?

Yes. Employment, self employment, partnership profits, dividends, property, savings interest above the allowance, foreign income and capital gains all have to be reported where they exceed the relevant limits. Small amounts of casual teaching or report income are the most commonly forgotten, and they are exactly what HMRC data matching picks up.

Why do I keep overpaying or underpaying tax with two jobs?

HMRC allocates your personal allowance to one employment and usually applies a basic or higher rate code to the other. If your income changes, or a third source appears, the codes rarely keep up. The final position is only corrected through self assessment, which is why the return matters even for mainly employed doctors.

How is teaching, appraisal or committee income taxed?

It depends on how the payer treats you. Some pay through payroll, which means PAYE has been applied. Others pay gross, in which case the income is self-employed and must be declared. We check each payment source rather than assuming, because the two are handled very differently on the return.

Can expenses be claimed against any income stream?

No. Expenses must be matched to the income they relate to, and the rules differ between employment and self employment. Employment expenses face a stricter wholly, exclusively and necessarily test. Allocating costs to the right stream is one of the most common corrections we make for new clients.

How do multiple income streams affect my NHS pension tax?

Adjusted income for the tapered Annual Allowance includes all your taxable income plus your pension growth. Doctors with several income sources therefore reach the taper far sooner than colleagues on a single salary, often without any warning from the scheme.

What is the 60 per cent effective tax band?

Between the point where the personal allowance begins to be withdrawn and the point where it is fully lost, each extra pound of income costs you both higher rate tax and part of your allowance, producing an effective rate of around 60 per cent. Pension contributions and gift aid are the usual tools for managing income within that band.

Should I put some of my income through a limited company?

Sometimes. Medico-legal work, private clinics or consultancy can suit a company, while NHS employment cannot go through one at all and locum work may fall inside IR35. The decision should be made across your whole income picture, including the NHS pension effect, not stream by stream.

How should I keep records with so many income sources?

One business bank account for self-employed work, cloud bookkeeping with receipt capture on your phone, and a habit of forwarding every remittance and statement to a single folder. We set this up during onboarding, and it usually takes clients under ten minutes a month afterwards.

Will Making Tax Digital affect me?

Making Tax Digital for Income Tax applies to self-employed and property income above set thresholds, with phased start dates. Doctors with self-employed private, locum or rental income are likely to be brought in, which means quarterly digital updates. We move affected clients onto compliant software well ahead of their start date.

How do I work out what to set aside for tax?

We calculate a single percentage across all your non-PAYE income, allowing for payments on account, any Annual Allowance charge and the child benefit charge. It is reviewed quarterly, because a strong private or locum year changes the figure significantly.

How much do you charge for a multi-income return?

We quote a fixed fee based on the number and complexity of your income streams. It is agreed before we start and includes unlimited telephone and email support through the year, so an extra question never means an extra invoice.

Can you take over from my current accountant?

Yes. We request professional clearance and handover information directly, review the previous returns for anything that should be amended, and take over from that point without you having to make an awkward call.

Please double-check the figures before you act. The tax, NHS pension and accounting information on this page is general guidance for UK doctors and healthcare professionals, not personal advice. Tax rates, allowances, thresholds and NHS pension rules change regularly, including at each Budget and at the start of every tax year on 6 April. Trading and property allowances, payments on account and the thresholds at which extra reporting is triggered change regularly. Always cross-check any rates or figures against HMRC, the NHS Business Services Authority and the latest Budget announcements, or speak to one of our qualified accountants before acting. CruseBurke cannot accept liability for decisions made solely on the basis of this page. Last reviewed: August 2026.